[FLASH-USERS] HDF5 or segmentation fault...

[Cristian Giovanny Bernal]

Hello flash-user,

I am trying to install FLASH2.5 in a new linux machine but I have very
problems. The libraries that I am using are:

1. Fortran 9.1 (noncommercial version)
2. MPI 2
3. HDF5 1.6.5

But I obtain an error very similar to which David(2005) & Owen(2004) report in
FLASH_WEB.
How I solved this problem (in the sedov example)? 

error 1:
------------------
guest at gaae1:~/FLASH2.5$ mpirun -np 1 object/flash2
object/flash2: error while loading shared libraries: libhdf5.so.0: cannot open
shared object file: No such file or directory
------------------

In order to solve this, I followed the suggestions (FAQs) of the manual
(setenv LD_LIBRARY_PATH /usr/local/src/hdf5-1.6.5/hdf5/lib), but did not give
results. Then I followed the suggestions that the users did to him to Owen (I
add the follow line in the linking flags...LFLAGS_HDF5  =
-Wl,-R/usr/local/src/hdf5-1.6.5/hdf5/lib)... but I obtained another message of
error:

eroor 2:
------------------------------
guest at gaae1:~/FLASH2.5$ mpirun -np 1 object/flash2
read_parameters:  unable to open parameter file "flash.par"

abort_flash called. See log file for details.
Calling MPI_Abort() for immediate shutdown!

forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image              PC        Routine            Line        Source
flash2             0818F844  Unknown               Unknown  Unknown
flash2             0818F837  Unknown               Unknown  Unknown

Stack trace terminated abnormally.
rank 0 in job 82  gaae1_44953   caused collective abort of all ranks
 exit status of rank 0: return code 174 
-------------------------------

Does anyone have any ideas?

 Thank you very much,
 Giovanny
 
-- 
Instituto de Astronomia 
Universid
ad Nacional Autonoma de Mexico (UNAM)
http://www.astroscu.unam.mx